BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017F07SP1|AL427188
(1001 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1638 1789 0.0
>3x_Contig1638
Length = 14042
Score = 1789 bits (899), Expect = 0.0
Identities = 953/965 (98%), Gaps = 7/965 (0%)
Strand = Plus / Minus
Query: 1 tcgtcagtcaaagccttttcgaattcggatgcggaagtaagttgagcgaccattatatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12793 tcgtcagtcaaagccttttcgaattcggatgcggaagtaagttgagcgaccattatatat 12734
Query: 61 gawattggaggggatagtaaagataaattgtaccttatttgatgaggatagaaagttatc 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12733 gaaattggaggggatagtaaagataaattgtaccttatttgatgaggatagaaagttatc 12674
Query: 121 agattatccgataatcaatcgaagagacaactaaataacctttaaatgtatcttacttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12673 agattatccgataatcaatcgaagagacaactaaataacctttaaatgtatcttacttcc 12614
Query: 181 tttatataatawtgttggttaaatatcgagtttttgacaaatttttgcttgctaatcagg 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12613 tttatataataatgttggttaaatatcgagtttttgacaaatttttgcttgctaatcagg 12554
Query: 241 aatcgagagctggaatcagctagaacccgtccatttgtaagcaggtggaagcgccaacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12553 aatcgagagctggaatcagctagaacccgtccatttgtaagcaggtggaagcgccaacac 12494
Query: 301 tcgtgtaacggtgttttgaatggcttgaattgactgtataatgttcaaccaacacgcatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12493 tcgtgtaacggtgttttgaatggcttgaattgactgtataatgttcaaccaacacgcatc 12434
Query: 361 agcgccgattgagtgattggaggggcgtgtacgtgtataatagatcctaccctcccatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12433 agcgccgattgagtgattggaggggcgtgtacgtgtataatagatcctaccctcccatta 12374
Query: 421 ttcaggtttctgcaaacccgatccaaagcatatcaacaaagtcacgtgatatatcacatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12373 ttcaggtttctgcaaacccgatccaaagcatatcaacaaagtcacgtgatatatcacatg 12314
Query: 481 acttgaaatcaatcgtttctgtaaacaaaaacaatcaaaatcaaccagtaaacaaacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12313 acttgaaatcaatcgtttctgtaaacaaaaacaatcaaaatcaaccagtaaacaaacaaa 12254
Query: 541 cagacgagacaacatgaataahatagacggtcagtgagtcaacacagggtgctgccagct 600
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 12253 cagacgagacaacatgaataaaatagacggtcagtgagtcaacacagggtgctgccagct 12194
Query: 601 gtatcgcgtgtgtatatctcccatggataacgctacggatgattcggcgtcttttcagac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12193 gtatcgcgtgtgtatatctcccatggataacgctacggatgattcggcgtcttttcagac 12134
Query: 661 tctgtcactagatgagagacttgttcataagctttggaaggcaagacagcatggatataa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12133 tctgtcactagatgagagacttgttcataagctttggaaggcaagacagcatggatataa 12074
Query: 721 tgagctagaaagcacattcaataaactgtccgttgctagagttgcagagagtggcgttaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12073 tgagctagaaagcacattcaataaactgtccgttgctagagttgcagagagtggcgttaa 12014
Query: 781 taagtattggaagaaacctgagattttcacggggtacgtattggattccaatgttgttgc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12013 taagtattggaagaaacctgagattttcacggggtacgtattggattccaatgttgttgc 11954
Query: 841 acaagaatctgccgttaa-gscttgtacagtttgttg-aatttatgatcgacgta-ccca 897
|||||||||||||||||| | |||||||||||||||| ||||||||||||||||| ||||
Sbjct: 11953 acaagaatctgccgttaaggccttgtacagtttgttgaaatttatgatcgacgtacccca 11894
Query: 898 gatcagagatttgtgtca-scgggtc-attggttca-ggctgggtt-cagctctggtgga 953
|||||||||||||||||| |||||| ||||||||| ||||||||| |||||||||||||
Sbjct: 11893 gatcagagatttgtgtcagccgggtcaattggttcagggctgggttccagctctggtgga 11834
Query: 954 gaaag 958
|||||
Sbjct: 11833 gaaag 11829
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6610
Number of Sequences: 1807
Number of extensions: 6610
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 1001
length of database: 10,358,551
effective HSP length: 16
effective length of query: 985
effective length of database: 10,329,639
effective search space: 10174694415
effective search space used: 10174694415
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)